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Rhabdomyosarcoma Translational Research

 

Joanna Selfe

Dr Joanna Selfe (CLT Senior Medical Researcher)

 

 

Job title: Scientific Officer

 

Research Section of the ICR: Molecular Cytogenetics

 

 

Can you tell us a bit about your background? I have just graduated from university in London where I studied Biomedical Science. I also studied for A levels in science subjects when I was at school as this is an area I have been interested in for a long time.

 

 

 

 

Rebecca Allen (CLT Scientific Officer)

 

What attracted you to work at the ICR? Whilst in my final year at university one of my modules was Cancer Genetics. I found it really interesting and thought that cancer research would be something I wanted to pursue. I was lucky enough to get an 8-week work experience placement at the ICR during the summer of 2009 and thoroughly enjoyed my time here. When it came to looking for a job I was very keen to return to the ICR as I had had such a good experience previously and also because of the world leading reputation the ICR has in terms of cancer research.

 

Can you tell us about your main areas of interest in cancer research? After completing my work experience here I became particularly interested in Rhabdomyosarcoma. It is a very rare cancer and so unfortunately is not widely spoken about in the media. However it is extremely aggressive and has a particularly low survival rate, which makes it a critical area for research. I was very interested in the work that was happening in Janet’s lab when I was here last summer and so knew it would be an area I would like to pursue as a career.

 

Can you explain more about your role within the paediatric oncology department?

I will be working closely with a number of people on some ongoing projects to do with various areas of research into identifying therapeutic targets for Rhabdomyosarcoma. The work I will be doing includes investigation of certain microRNAs that have been shown to be up or down regulated in Rhabdomyosarcoma relative to normal tissue. The research will look at the effects this has on tumour development and prognosis with the hopes of identifying miRNAs involved in maintaining the undifferentiated muscle phenotype seen in Rhabdomyosarcoma. I am also very honoured and pleased to be working on behalf of the Chris Lucas Trust, which I believe is a fantastic cause.

How will the research ultimately help young patients with rhabdomyosarcoma?

The aim of the research is ultimately to find novel therapeutic targets for Rhabdomyosarcoma.  I hope that during my time at the ICR I can be instrumental in helping work towards this aim.

 

Have you enjoyed a particular ‘eureka’ moment in your career/studies so far?

I was very lucky that my final year project at university went according to plan. My results were completely fresh and the genes I was working with had never been investigated before. When it came to writing up my dissertation I was very excited to share what I had achieved as it had not been written about before.

I would like to work for a few years in cancer research labs and gain knowledge and experience with the hope of eventually doing a PhD.

 And finally, what do you enjoy doing away from the labs? Outside of work I like to keep fit by going to the gym and walking. I enjoy going out with my friends for drinks and to watch films or just relaxing at home reading and spending time with my family.

 

We remain extremely grateful to the Chris Lucas Trust for the first year’s funding towards Rebecca’s role, as well as your continuing long-term support. If you would like any further information about the research, please don’t hesitate to contact me on the details below.

 

What is Rhabdomyosarcoma?

Translational Research in Rhabdomyosarcoma

May 15th 2008 Senior Scientist exclusively funded by Chris Lucas Trust for Rhabdomyosarcom (RMS)

25th April 2008 Title: Identification of therapeutic targets through genomic and expression profiling rhabdomyosarcomas

May 15th 2008

Senior Scientist exclusively funded by Chris Lucas Trust for Translational Research in Rhabdomyosarcom (RMS)

By Lynn Lucas

On behalf of the Chris Lucas Trust  we are delighted  to announce we have  extended the contract of our  senior post doctoral scientist a further 3 years  to work exclusively on Translational Research in Rhabdomyosarcoma (RMS) on behal of the Chris Lucas Trust, the charity has exclusively funded this position since 2005 based at the Royal Marsden Hospital, London,  Institute of Cancer Research, Innovative Therapies for Children with Cancer (ITCC)

The institute was chosen as the  'rhabdomyosarcoma biology lab' for a new European consortium called Innovative Therapies for Children with Cancer (ITCC)
- of which Professor Herbie Newell, Newcastle University,  is also a member.

Professor Andy Pearson who was appointed February 1st 2005. to the Chair, at this institute, focussing on clinical trials of new drugs and will certainly be linked with our vital work on rhabdomyosarcoma, and he is very supportive of this, so the Newcastle link with this centre will be even stronger.

The institute was chosen as the  'rhabdomyosarcoma biology lab' for a new European consortium called Innovative Therapies for Children with Cancer (ITCC)
- of which Professor Herbie Newell, Newcastle University,  is also a member.

We are leading in the area of testing existing new drugs for activity against rhabdomyosarcoma.

Our research group is also very interested in the underlying molecular abnormalities in RMS that might be important as targets for developing new drugs.

Dr Kathy Pritchard -Jones, and Dr Janet Shipley, who leads the molecular cytogenetics group, are planning several interacting projects on rhabdomyosarcoma, all of which aim to help identify new, effective drug targets and treatment for this dreadful disease..

The Chris Lucas Trust is funding the senior post-doctoral scientist for a further three years  to work on the molecular characterision of rhabdomyosarcoma, using 'microarray' profiling which tests thousands of genes
simultaneously.

By looking at how these results predict response to treatment, we aim to highlight the important genes for choosing new drugs to test on RMS cell lines and in the clinic and  aim to identify new targets for developing new drugs.

Chris Lucas Trust says  "the costs of doing these types of experiments is expensive, as is the amount needed to keep a scientist working at the bench using modern molecular techniques. We desperately need vital donations to ensure the continuous work of our Senior Researcher".
The funding is over £210,000 for three years (about $368,000) It is so expensive but unfortunately these are the costs of modern molecular medicine".

25th April 2008

Title:              Identification of therapeutic targets through genomic and expression profiling rhabdomyosarcomas

Report by:  Dr. Edoardo Missiaglia, Dr. Janet Shipley and Professor Kathy Pritchard-Jones, The Institute of Cancer Research/Royal Marsden Hospital NHS Trust, Sutton, Surrey

Date:              25th April 2008 

Lay summary

 Rhabdomyosarcomas are rare cancers but are one of the leading causes of death from cancer in children.  Our aim is to understand the mechanisms that lead a normal cell to develop into a rhabdomyosarcoma in order to improve the treatment of children with these tumours. 

Genes produce “messages” which are usually converted in molecules that perform specific tasks inside the cells that make up our body. Genes may produce too much, too little or even wrong “messages”, that can lead a cell to become cancerous.  We are using techniques that measure the levels of these “messages” from thousands of different genes and also molecules called microRNAs which modify the levels of these “messages” in cells.  We have made great progress in screening samples of rhabdomyosarcomas for these changes in collaboration with other experts in the field.  Our preliminary analysis has already identified genes for further investigation and we have prepared a scientific manuscript that will report our findings.

Further genes will be identified and experiments will determine the role these play in the development of rhabdomyosarcomas. These may represent molecular targets specific to the tumours and lead to novel therapeutic treatments for children with rhabdomyosarcoma. 

We are indebted to the Chris Lucas Trust for supporting this research.

What is Rhabdomyosarcoma?

Rhabdomyosarcoma (Rhab – do – my – o - sarcoma) is one of the most aggressive out of the various types over 400 types of cancers.

It is a disease in which cancer (malignant) cells begin growing in muscle tissue anywhere in the body.

There are several types of Sarcoma that are found in children and young adults. The cancer cells must be looked at under a microscope to tell which type of sarcoma it is. It accounts for approximately 3.5% of the cases of cancer among young children 0 to 14 years, and 2% of the cases among adolescents and young adults 15 to 19 years of age. It is a curable decease in the majority of children who receive optimal therapy with more than surviving 5 years after diagnosis.

The most common primary sites for Rhabdomyosarcoma are the head and neck, other less common sites include the trunk, intrathoracic region, the gastrointestinal tract and the extremities (arms, legs) intestines, including liver and biliary tract, and the perineal/anal region.

 

Molecular Cytogenetics Team
 

Section: Section of Molecular Carcinogenesis
 

Rhabdomyosarcomas are the most common paediatric soft-tissue sarcomas accounting for around 5% of all childhood cancers. Rhabdomyosarcomas resemble developing skeletal muscle and express markers indicative of early myogenic development. Rhabdomyosarcomas are broadly divided into two main subgroups on the basis of histology; alveolar and embryonal rhabdomyosarcomas. Alveolar rhabdomyosarcoma are generally associated with a poorer prognosis than the embryonal subtype and often contain either a t(2;13)(q35;q14) or t(1;13)(p36;q14) translocation which produces a PAX3/FOX01A or PAX7/FOX01A gene fusion, respectively. Despite the generally better prognosis of embryonal rhabdomyosarcoma, some cases do not respond well to therapy and have a poor outcome. Currently, there are no predictive molecular markers for poor outcome in the embryonal subtype. More effective therapeutic approaches are required for all poor prognostic categories and better prognostic markers are required at diagnosis to improve selection of patients who can be cured with less intensive treatments with fewer toxic long-term side-effects. Increasing understanding of the underlying molecular biology will help address these issues.

Identification and role of amplified and/or overexpressed genes in the development of rhabdomyosarcoma

We have identified patterns of genetic imbalance and differential expression in the two main subtypes and these are being further refined. Definition of the smallest overlapping regions of gain, including those at 2p24 and 13q31-32, suggest involvement of particular genes in the development of rhabdomyosarcomas. The MYCN gene at 2p24 has been implicated and a role for the protein in rhabdomyosarcomagenesis determined. The only annotated genes in the minimum region defined in the 13q31-32 amplicon were C13orf25 gene encoding the microRNA cluster miR-17-92 and Glypican-5 (GPC5). GPC5 was the only gene consistently overexpressed from the 13q31-32 amplicon and oncogenic roles for the cell surface proteoglycan that this gene encodes have been demonstrated.

 

Identification of amplicons in rhabdomyosarcoma

 

Clinical relevance

We have shown that amplification and expression of the MYCN gene correlates with an adverse prognosis in the alveolar subtype and inhibiting expression of MYCN represents a possible therapeutic strategy.

We have shown that GPC5 protein is shed or secreted from cells cultured in vitro which is consistent with potential as a biomarker of disease. Evidence also supports the involvement of GPC5 in tumour types in addition to RMS. The properties and function of GPC5 represent a potential target for novel therapies and approaches to target GPC5 are being explored.

In collaboration with the Section of Paediatrics, a high-through-put screen by the Cancer Research UK Section of Cancer Therapeutics aims to identify compounds with activity against alveolar RMS with the PAX3-FOXO1A fusion gene. As part of a European Consortium – Innovative Therapies for Childhood Cancer – we and members of Professor Kathy Pritchard-Jones’ group are involved in determining the presence of targets to new agents not currently used in RMS treatment and in evaluating their effects in cell lines.

 

The Institute of Cancer Research

Translational Research in Rhabdomyosarcoma

Childhood Cancer Biology Team
 

Section: Section of Paediatric Oncology
 

Rhabdomyosarcoma is an embryonal skeletal muscle cancer that occurs in young children and in adolescents. There is already a known molecular marker associated with the alveolar subtype and a worse clinical outcome. This is the reciprocal balanced chromosomal translocation, t(2p36;13q32) which fuses the PAX3 gene on chromosome 2 to the Forkhead related gene, FKHR (FOXO1A) on 13q32. Previous work in the team of Dr Janet Shipley has shown the presence of several regions of amplification of genetic material mainly in alveolar rhabdomyosarcoma (particularly 2p24, 13q31). These have been analysed further by comparative expressed sequence hybridisation (CESH) and array comparative genomic hybridisation (CGH). This has defined the smallest region of gain and identified overexpressed genes whose clinical and biological relevance is now being pursued. A retrospective collection of tumours from patients enrolled in the previous national clinical trials (MMT 89, 95 and 98) is underway to allow comprehensive analysis of the presence of the PAX3-FOXO1A fusion gene and its variants, alongside comprehensive immunohistochemical studies of relevant biological pathways on tissue arrays.

This research area is carried out in collaboration with JM Shipley, D Williamson, E Missaglia, Section of Molecular Carcinogenesis, J Anderson, Institute of Child Health and A Kelsey & B Guertl-Lackner, Dept Paediatric Pathology, Manchester Children's Hospital.

Drug discovery for rhabdomyosarcoma

Investigators: K Pritchard-Jones, J Renshaw, O Slater; in collaboration with JM Shipley, E Missaglia, D Williamson, Section of Molecular Carcinogenesis; P Workman, W Aherne, R Orr (Section of Cancer Therapeutics)

We are investigating the cytotoxicity of novel biological agents in rhabdomyosarcoma cell lines that are well characterized for a range of molecular abnormalities associated with prognosis. Efficacy is evaluated in relation to the presence of known or putative molecular targets for these novel agents in primary tumour samples. Part of this work is within a European consortium for Innovative Therapies for Children with Cancer (ITCC). In parallel, we have begun a high-throughput screen for compounds showing activity against alveolar rhabdomyosarcoma bearing the characteristic PAX3-FOXO1A fusion gene.

The Institute of Cancer Research